Let's talk about workflows
- Workflow orchestration tools automate repetitive tasks, saving time and resources.
- Well-defined workflows facilitate efficient and accurate revisions in complex analyses.
Snakemake
- Snakemake automates complex computational pipelines, ensuring efficient resource utilization and avoiding unnecessary computations.
- The Snakefile contains a list of rules describing the pipeline.
- Snakemake manages the workflow execution based on file timestamps.
- Snakemake contains some tools that allows you to debug and validate
your workflows, like
--dry-run,--dag, or--rulegraph.
A simple SUSY analysis
- Understanding the importance of containerized environments in ensuring consistent and isolated execution of Snakemake workflows.
- Recognizing the role of REANA in simplifying the execution of complex workflows, especially those requiring CERN-specific tools and resources.
Running workflows in REANA
- REANA is more than just a platform for reproducible analysis; it’s a comprehensive analysis facility capable of handling large-scale high-energy physics workflows.
- To ensure reproducibility, it’s crucial to make our workflows independent of the specific analysis facility, such as REANA.
Expanding the SUSY analysis
- Explore the REANA team’s compilation of examples on their GitHub for more inspiration and advanced use cases.
- Utilize the REANA support channels, such as the official Mattermost channel and forum, for assistance and community support.